Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS35485

Experiment: 36hr PHYTO6 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO6 MOI 1
3,562,111	-				-1.2
3,562,126	-				-1.1
3,562,130	-				+2.4
3,562,256	+				-2.5
3,562,345	+		BPHYT_RS35485	0.10	-0.6
3,562,345	+		BPHYT_RS35485	0.10	-0.4
3,563,179	+		BPHYT_RS35485	0.72	+0.2
3,563,179	+		BPHYT_RS35485	0.72	-0.4
3,563,278	+		BPHYT_RS35485	0.79	-0.0
3,563,345	-		BPHYT_RS35485	0.84	-1.1
3,563,345	-		BPHYT_RS35485	0.84	+0.3
3,563,814	+				-0.1
3,563,951	+		BPHYT_RS35490	0.17	+1.0
3,563,951	+		BPHYT_RS35490	0.17	+0.6
3,563,993	+		BPHYT_RS35490	0.24	-0.5
3,563,994	-		BPHYT_RS35490	0.25	-0.4
3,564,016	+		BPHYT_RS35490	0.29	+1.3
3,564,016	+		BPHYT_RS35490	0.29	-1.0
3,564,017	-		BPHYT_RS35490	0.29	+0.3
3,564,262	+		BPHYT_RS35490	0.72	+0.7
3,564,472	+				+0.4