Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS31825

Experiment: 36hr PHYTO6 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO6 MOI 1
2,699,701	+				+0.1
2,699,702	-				+0.8
2,699,702	-				-2.1
2,699,760	-				+0.8
2,699,838	+				+0.4
2,699,910	-				-0.8
2,699,912	+				-0.0
2,699,936	-				+0.6
2,700,016	-				+1.5
2,700,022	-				-0.8
2,700,072	-		BPHYT_RS31825	0.10	+1.0
2,700,122	+		BPHYT_RS31825	0.15	-2.5
2,700,150	-		BPHYT_RS31825	0.18	-1.2
2,700,261	-		BPHYT_RS31825	0.29	-0.9
2,700,485	+		BPHYT_RS31825	0.50	-0.1
2,701,150	+		BPHYT_RS31830	0.12	-1.1
2,701,220	+		BPHYT_RS31830	0.35	-0.2
2,701,600	-				-1.2
2,701,617	-				+2.4