Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS30940

Experiment: 36hr PHYTO6 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO6 MOI 1
2,496,038	+		BPHYT_RS30935	0.58	+0.3
2,496,450	-		BPHYT_RS30935	0.89	+0.8
2,496,451	+		BPHYT_RS30935	0.89	-2.1
2,496,524	+				-0.1
2,496,524	+				+0.7
2,496,525	-				-0.7
2,496,763	+		BPHYT_RS30940	0.12	-0.2
2,497,331	-		BPHYT_RS30940	0.71	+0.3
2,497,331	-		BPHYT_RS30940	0.71	-0.3
2,497,341	-		BPHYT_RS30940	0.72	+0.3
2,497,341	-		BPHYT_RS30940	0.72	-0.1
2,497,447	+		BPHYT_RS30940	0.83	+0.1
2,497,645	-				+0.0
2,497,651	-				+0.5
2,497,863	+				-0.1
2,498,209	-		BPHYT_RS30945	0.40	-1.0
2,498,233	-		BPHYT_RS30945	0.43	-2.1
2,498,289	+		BPHYT_RS30945	0.48	+1.6
2,498,290	-		BPHYT_RS30945	0.48	-1.4
2,498,442	-		BPHYT_RS30945	0.63	-1.8