Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS29550

Experiment: 36hr PHYTO6 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO6 MOI 1
2,179,784	-		BPHYT_RS29545	0.13	-1.2
2,179,973	+		BPHYT_RS29545	0.46	-0.4
2,180,393	+				+0.6
2,180,394	-				-0.2
2,180,594	+				-3.0
2,180,633	-				+0.7
2,180,633	-				-0.4
2,180,755	+				-0.6
2,181,027	-		BPHYT_RS29550	0.17	+0.9
2,181,798	+		BPHYT_RS29550	0.68	-0.4
2,182,114	-		BPHYT_RS29550	0.88	-2.4
2,182,114	-		BPHYT_RS29550	0.88	-0.4
2,182,157	-				+0.0
2,182,716	-		BPHYT_RS29555	0.31	-0.8
2,182,769	-		BPHYT_RS29555	0.35	+0.1
2,182,930	+		BPHYT_RS29555	0.49	+1.4
2,182,931	-		BPHYT_RS29555	0.49	-0.4
2,183,059	+		BPHYT_RS29555	0.60	-1.3
2,183,182	+		BPHYT_RS29555	0.71	-1.0
2,183,183	-		BPHYT_RS29555	0.71	-1.6
2,183,252	-		BPHYT_RS29555	0.77	-1.4
2,183,274	-		BPHYT_RS29555	0.79	-0.5