Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS20205

Experiment: 36hr PHYTO6 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO6 MOI 1
77,959	+				-1.9
77,959	+				+0.9
77,978	-				+0.2
77,996	-				-1.4
78,077	-				+0.2
78,167	-				-0.6
78,185	-				-0.2
78,194	-				+0.7
78,338	-				+0.8
78,460	+				-2.8
78,503	-				-0.8
78,522	+				+0.3
78,534	-				-0.2
78,539	-				-0.0
78,676	+				+1.1
78,677	-				-0.5
78,766	-				-1.1
78,787	+				-0.8
78,844	+				+1.1
78,878	-				-1.5
78,919	+				-0.7
79,098	-		BPHYT_RS20205	0.20	-0.3
79,098	-		BPHYT_RS20205	0.20	-1.7
79,411	-		BPHYT_RS20205	0.47	-0.7
79,411	-		BPHYT_RS20205	0.47	-0.6
79,411	-		BPHYT_RS20205	0.47	-0.8
79,411	-		BPHYT_RS20205	0.47	+0.2
79,653	+		BPHYT_RS20205	0.68	-1.6
79,654	-		BPHYT_RS20205	0.68	-0.3
79,654	-		BPHYT_RS20205	0.68	-1.5
80,046	+				+0.2
80,167	+		BPHYT_RS20210	0.47	-0.3
80,318	+				-0.5
80,319	-				+0.5
80,319	-				+3.2
80,355	+				-0.7
80,426	+				-1.4
80,506	+				-0.5
80,507	-				-0.1
80,685	-				+1.0
80,722	+				+0.2
80,723	-				-0.3
80,806	-				-0.5
80,806	-				-0.6