Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS15115

Experiment: 36hr PHYTO6 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO6 MOI 1
3,439,890	-				+0.3
3,439,890	-				+0.3
3,439,890	-				-0.5
3,439,890	-				+0.0
3,440,044	+				-0.8
3,440,044	+				-2.8
3,440,048	+				-0.2
3,440,048	+				-1.6
3,440,048	+				-0.1
3,440,048	+				-1.7
3,440,049	-				+0.6
3,440,049	-				+0.8
3,440,049	-				+1.4
3,440,049	-				+0.4
3,440,049	-				+0.6
3,440,050	+		BPHYT_RS15110	0.10	+1.3
3,440,050	+		BPHYT_RS15110	0.10	-1.5
3,440,051	-		BPHYT_RS15110	0.10	+1.5
3,440,456	+		BPHYT_RS15110	0.65	-0.4
3,440,457	-		BPHYT_RS15110	0.65	+0.8
3,440,585	+		BPHYT_RS15110	0.83	-1.1
3,440,585	+		BPHYT_RS15110	0.83	-0.5
3,440,757	-				+2.0
3,440,844	+				-1.0
3,440,845	-				+0.1
3,440,845	-				+0.7
3,441,198	+		BPHYT_RS15115	0.80	-0.3
3,441,199	-		BPHYT_RS15115	0.80	-0.1
3,441,448	+		BPHYT_RS15120	0.24	-0.6
3,441,642	+		BPHYT_RS15120	0.70	-1.8
3,441,752	+				-1.0
3,441,794	-				+0.3
3,441,864	+				+1.7
3,441,999	+		BPHYT_RS15125	0.15	+1.3
3,442,165	-		BPHYT_RS15125	0.29	+0.5
3,442,165	-		BPHYT_RS15125	0.29	+0.4