Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS14140

Experiment: 36hr PHYTO6 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO6 MOI 1
3,227,544	+				+1.7
3,227,569	+				+0.1
3,227,570	-				+1.5
3,227,570	-				+1.2
3,227,689	+		BPHYT_RS14135	0.13	+0.7
3,227,689	+		BPHYT_RS14135	0.13	+0.9
3,228,300	-		BPHYT_RS14135	0.82	+1.5
3,228,444	-				+1.8
3,228,619	+		BPHYT_RS14140	0.16	-0.0
3,228,619	+		BPHYT_RS14140	0.16	+1.0
3,228,620	-		BPHYT_RS14140	0.16	+4.1
3,228,997	-		BPHYT_RS14140	0.53	+3.8
3,229,194	+		BPHYT_RS14140	0.73	+0.8
3,229,195	-		BPHYT_RS14140	0.73	+3.9
3,229,195	-		BPHYT_RS14140	0.73	+4.7
3,229,531	-				+0.1
3,229,572	-				+0.2
3,229,572	-				+0.2
3,229,575	+				+0.1
3,229,575	+				+0.2
3,229,575	+				+1.9
3,229,576	-				+0.9
3,229,576	-				+1.5
3,229,613	-				+1.4
3,229,613	-				+1.5
3,229,702	+				+0.8
3,229,703	-				+2.3
3,229,703	-				+2.7
3,229,703	-				+1.1
3,229,703	-				+1.6
3,229,703	-				+1.6
3,229,868	-		BPHYT_RS14145	0.25	+1.9
3,229,964	-		BPHYT_RS14145	0.34	+3.2
3,229,964	-				+3.3
3,229,964	-		BPHYT_RS14145	0.34	+1.2
3,230,138	-		BPHYT_RS14145	0.51	+2.8
3,230,269	+		BPHYT_RS14145	0.64	-2.4
3,230,269	+		BPHYT_RS14145	0.64	+0.4
3,230,269	+				-0.0
3,230,269	+		BPHYT_RS14145	0.64	-1.7
3,230,270	-		BPHYT_RS14145	0.64	+1.6
3,230,270	-		BPHYT_RS14145	0.64	+2.5
3,230,270	-		BPHYT_RS14145	0.64	+1.4
3,230,270	-		BPHYT_RS14145	0.64	+1.9
3,230,270	-		BPHYT_RS14145	0.64	+1.7
3,230,270	-		BPHYT_RS14145	0.64	+2.1