Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS12500

Experiment: 36hr PHYTO6 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO6 MOI 1
2,851,526	+		BPHYT_RS12495	0.66	-0.0
2,851,527	-		BPHYT_RS12495	0.66	-0.5
2,851,721	+		BPHYT_RS12495	0.74	+0.9
2,851,721	+		BPHYT_RS12495	0.74	-1.9
2,851,724	+		BPHYT_RS12495	0.74	-2.2
2,851,724	+		BPHYT_RS12495	0.74	-0.0
2,851,725	-		BPHYT_RS12495	0.74	-1.1
2,851,736	+		BPHYT_RS12495	0.75	+0.2
2,851,736	+		BPHYT_RS12495	0.75	-0.2
2,851,759	-		BPHYT_RS12495	0.76	-0.9
2,851,890	-		BPHYT_RS12495	0.82	+0.7
2,851,895	+		BPHYT_RS12495	0.82	-0.7
2,851,895	+		BPHYT_RS12495	0.82	+0.0
2,851,895	+		BPHYT_RS12495	0.82	-2.2
2,851,896	-		BPHYT_RS12495	0.82	-1.5
2,851,896	-		BPHYT_RS12495	0.82	+1.3
2,851,896	-		BPHYT_RS12495	0.82	-1.4
2,852,518	+		BPHYT_RS12500	0.67	-1.4
2,852,518	+		BPHYT_RS12500	0.67	-1.1
2,852,518	+		BPHYT_RS12500	0.67	-2.3
2,852,519	-		BPHYT_RS12500	0.67	+0.7
2,852,719	+				-0.5
2,852,719	+				+3.3
2,852,719	+				-0.1