Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS09815

Experiment: 36hr PHYTO6 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO6 MOI 1
2,228,082	+		BPHYT_RS09805	0.36	+1.8
2,228,091	+		BPHYT_RS09805	0.37	-0.5
2,228,092	-		BPHYT_RS09805	0.37	+2.6
2,228,157	+		BPHYT_RS09805	0.45	+0.6
2,228,232	+		BPHYT_RS09805	0.55	+2.4
2,228,236	-		BPHYT_RS09805	0.55	-0.2
2,228,237	+		BPHYT_RS09805	0.56	-0.2
2,228,238	-		BPHYT_RS09805	0.56	-2.3
2,228,495	-		BPHYT_RS09805	0.88	+0.3
2,228,548	-				-0.6
2,228,548	-				+0.2
2,228,691	-		BPHYT_RS09810	0.42	+1.4
2,228,762	+		BPHYT_RS09810	0.73	+0.0
2,228,762	+		BPHYT_RS09810	0.73	+0.3
2,228,802	-				-0.5
2,229,984	+		BPHYT_RS09815	0.46	-1.6
2,230,571	-		BPHYT_RS09815	0.73	+1.4
2,230,879	+		BPHYT_RS09815	0.88	+0.4
2,230,881	+		BPHYT_RS09815	0.88	+0.4
2,230,881	+		BPHYT_RS09815	0.88	+4.3
2,231,678	+				+0.0
2,231,701	+				-0.9
2,232,095	+				+0.9
2,232,096	-				-0.7