Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS09680

Experiment: 36hr PHYTO6 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO6 MOI 1
2,193,526	+				+1.8
2,193,527	-				+0.3
2,193,850	+				+0.8
2,193,851	-				-1.2
2,193,889	-				+1.3
2,193,889	-				-0.7
2,194,126	+		BPHYT_RS09675	0.47	+0.3
2,194,127	-		BPHYT_RS09675	0.47	+0.4
2,194,150	-		BPHYT_RS09675	0.51	-0.6
2,194,171	+		BPHYT_RS09675	0.55	-0.6
2,194,171	+		BPHYT_RS09675	0.55	-0.5
2,194,268	+		BPHYT_RS09675	0.71	-0.2
2,194,269	-		BPHYT_RS09675	0.71	-1.0
2,194,500	-				-0.4
2,194,501	+				-0.3
2,194,945	-		BPHYT_RS09685	0.16	+0.2
2,195,008	+		BPHYT_RS09685	0.30	-0.3
2,195,009	-		BPHYT_RS09685	0.30	-1.0
2,195,009	-		BPHYT_RS09685	0.30	-0.8
2,195,038	+		BPHYT_RS09685	0.36	-0.5
2,195,039	-		BPHYT_RS09685	0.36	+0.4
2,195,212	+		BPHYT_RS09685	0.75	-1.3
2,195,320	-				-0.6
2,195,378	-				+1.3
2,195,385	+				+0.0
2,195,385	+				-0.6