Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS09260

Experiment: 36hr PHYTO6 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO6 MOI 1
2,096,442	+				+0.0
2,096,447	+				+0.6
2,096,911	-				-0.5
2,096,996	-				-1.7
2,096,997	+				-1.1
2,096,997	+				+0.3
2,096,998	-				-2.6
2,097,003	-				+0.7
2,097,003	-				-0.4
2,097,003	-				+0.5
2,097,207	+				-2.5
2,098,220	-		BPHYT_RS09260	0.53	-1.0
2,098,751	-		BPHYT_RS09260	0.86	+0.0
2,098,751	-		BPHYT_RS09260	0.86	+0.3
2,098,754	-		BPHYT_RS09260	0.86	-0.5
2,098,789	+		BPHYT_RS09260	0.89	+0.2
2,098,789	+		BPHYT_RS09260	0.89	-0.5
2,098,876	-				-0.8
2,099,011	+				+1.3
2,099,082	+				-3.1
2,099,192	+		BPHYT_RS09265	0.27	-1.5
2,099,454	-		BPHYT_RS09265	0.78	+0.5
2,099,474	+		BPHYT_RS09265	0.82	-1.4
2,099,609	-				+0.5
2,099,626	+				-0.5
2,099,678	+				+1.0
2,099,920	+		BPHYT_RS09270	0.14	+0.6