Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS09240

Experiment: 36hr PHYTO6 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO6 MOI 1
2,091,127	+				-0.4
2,091,142	+				-1.1
2,091,285	-				+0.3
2,091,342	-				-0.5
2,091,386	-				+0.2
2,091,386	-				+0.2
2,091,526	+		BPHYT_RS09235	0.25	-1.1
2,091,526	+		BPHYT_RS09235	0.25	-0.7
2,091,526	+		BPHYT_RS09235	0.25	-1.5
2,091,662	+		BPHYT_RS09235	0.49	+0.8
2,091,663	-		BPHYT_RS09235	0.50	+0.1
2,092,055	+				+0.5
2,092,378	-		BPHYT_RS09240	0.49	-0.8
2,092,413	-		BPHYT_RS09240	0.53	-0.7
2,092,413	-		BPHYT_RS09240	0.53	-0.1
2,092,598	+		BPHYT_RS09240	0.76	-0.3
2,092,598	+		BPHYT_RS09240	0.76	-0.1
2,092,599	-		BPHYT_RS09240	0.76	+0.3
2,092,654	+		BPHYT_RS09240	0.83	-0.1
2,092,654	+		BPHYT_RS09240	0.83	+0.0
2,092,655	-		BPHYT_RS09240	0.83	-2.4
2,092,655	-		BPHYT_RS09240	0.83	-0.8
2,093,257	+		BPHYT_RS09245	0.65	+0.7
2,093,258	-		BPHYT_RS09245	0.65	-0.5
2,093,367	+		BPHYT_RS09245	0.80	-0.9
2,093,496	+				-0.8
2,093,497	-				+0.9
2,093,497	-				+0.4
2,093,540	-				-0.8