Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS07965

Experiment: 36hr PHYTO6 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO6 MOI 1
1,810,822	-				-0.1
1,810,822	-				+0.0
1,810,853	-				+1.1
1,810,892	-				-0.7
1,810,893	+				-0.7
1,811,339	-				+0.8
1,811,377	+				-0.4
1,811,378	-				-0.4
1,811,673	+		BPHYT_RS07960	0.43	+0.7
1,811,675	+		BPHYT_RS07960	0.44	-1.1
1,811,791	-				+0.9
1,812,088	-		BPHYT_RS07965	0.10	-0.4
1,812,692	-		BPHYT_RS07965	0.34	-0.6
1,812,899	-		BPHYT_RS07965	0.42	-0.5
1,812,920	-		BPHYT_RS07965	0.43	+0.3
1,812,920	-		BPHYT_RS07965	0.43	-1.7
1,812,945	+		BPHYT_RS07965	0.44	-0.3
1,813,239	+		BPHYT_RS07965	0.56	+0.7
1,813,375	+		BPHYT_RS07965	0.61	+0.5
1,813,648	-		BPHYT_RS07965	0.72	-1.5
1,813,915	+		BPHYT_RS07965	0.82	-1.2
1,813,921	+		BPHYT_RS07965	0.82	-0.7
1,813,921	+		BPHYT_RS07965	0.82	+0.3
1,813,921	+		BPHYT_RS07965	0.82	-0.7
1,813,922	-		BPHYT_RS07965	0.82	-0.3
1,813,922	-		BPHYT_RS07965	0.82	-0.3
1,814,011	-		BPHYT_RS07965	0.86	-0.5
1,814,011	-		BPHYT_RS07965	0.86	-0.4
1,814,048	-		BPHYT_RS07965	0.87	+0.0
1,814,185	+				+0.1
1,814,205	-				-1.0
1,814,283	+				-0.7
1,814,533	+				+0.7
1,814,533	+				-0.5
1,814,533	+				+1.2
1,814,534	-				+1.2
1,814,534	-				+1.7