Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS07735

Experiment: 36hr PHYTO6 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO6 MOI 1
1,758,818	-		BPHYT_RS07730	0.36	-0.1
1,759,336	+				-1.0
1,759,339	-				+2.0
1,759,339	-				+0.8
1,759,425	+				+0.2
1,759,426	-				-0.3
1,759,426	-				+1.2
1,759,430	-				-0.9
1,759,510	+				+2.3
1,759,510	+				+0.0
1,759,511	-				+0.5
1,759,665	-				+0.2
1,759,760	-		BPHYT_RS07735	0.15	-1.3
1,759,981	+		BPHYT_RS07735	0.43	-0.2
1,760,052	+		BPHYT_RS07735	0.52	-0.5
1,760,053	-		BPHYT_RS07735	0.52	-1.4
1,760,053	-		BPHYT_RS07735	0.52	-0.9
1,760,159	-		BPHYT_RS07735	0.65	-1.5
1,760,434	+				-1.3
1,760,460	+				-1.0
1,760,595	-				+0.7
1,760,595	-				+0.3
1,760,728	-		BPHYT_RS07740	0.26	+0.1
1,760,728	-		BPHYT_RS07740	0.26	-0.5
1,760,847	+		BPHYT_RS07740	0.42	-0.1
1,760,847	+		BPHYT_RS07740	0.42	-0.5
1,760,848	-		BPHYT_RS07740	0.42	+0.2
1,760,884	-		BPHYT_RS07740	0.47	-0.1
1,760,997	+		BPHYT_RS07740	0.61	-0.5
1,760,997	+		BPHYT_RS07740	0.61	-0.2
1,760,997	+		BPHYT_RS07740	0.61	-1.3
1,760,998	-		BPHYT_RS07740	0.62	+0.1
1,761,001	+		BPHYT_RS07740	0.62	-0.5
1,761,034	-		BPHYT_RS07740	0.66	-0.2
1,761,034	-		BPHYT_RS07740	0.66	-1.7
1,761,034	-		BPHYT_RS07740	0.66	+0.3
1,761,396	+				-0.8
1,761,397	-				+1.2