Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS04490

Experiment: 36hr PHYTO6 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO6 MOI 1
1,038,908	+				+1.0
1,039,017	-				-0.8
1,039,154	+		BPHYT_RS04490	0.26	+0.3
1,039,154	+		BPHYT_RS04490	0.26	-2.4
1,039,154	+		BPHYT_RS04490	0.26	+0.3
1,039,155	-		BPHYT_RS04490	0.26	-0.3
1,039,339	-		BPHYT_RS04490	0.52	-1.5
1,039,348	+		BPHYT_RS04490	0.54	-1.9
1,039,509	+		BPHYT_RS04490	0.76	-1.9
1,039,891	+		BPHYT_RS04495	0.32	-0.6
1,039,930	-		BPHYT_RS04495	0.38	-0.5
1,039,930	-		BPHYT_RS04495	0.38	-0.1
1,040,166	+		BPHYT_RS04495	0.74	-1.0
1,040,166	+		BPHYT_RS04495	0.74	-0.0
1,040,166	+		BPHYT_RS04495	0.74	-0.3
1,040,167	-		BPHYT_RS04495	0.74	-1.1
1,040,196	+		BPHYT_RS04495	0.79	+0.4
1,040,197	-		BPHYT_RS04495	0.79	-0.4
1,040,197	-		BPHYT_RS04495	0.79	+0.2
1,040,348	+				-0.0
1,040,369	+				+0.4
1,040,609	+		BPHYT_RS04500	0.38	-0.4