Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS34290

Experiment: 36hr PHYTO10 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO10 MOI 1
3,297,546	+		BPHYT_RS34285	0.70	-1.6
3,297,690	+		BPHYT_RS34285	0.76	+0.4
3,297,693	+		BPHYT_RS34285	0.76	-2.1
3,298,078	-				+0.4
3,298,410	+				-0.3
3,298,605	-		BPHYT_RS34290	0.21	+0.4
3,298,651	+		BPHYT_RS34290	0.27	-0.1
3,298,795	+		BPHYT_RS34290	0.46	-0.1
3,298,907	-		BPHYT_RS34290	0.61	-0.7
3,298,961	+		BPHYT_RS34290	0.68	-0.7
3,299,041	-		BPHYT_RS34290	0.79	+1.0
3,299,352	+		BPHYT_RS34295	0.14	-0.2
3,299,885	+				+2.2
3,300,058	+				-0.3
3,300,151	-				-0.9