Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS34230

Experiment: 36hr PHYTO10 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO10 MOI 1
3,280,609	+		BPHYT_RS34225	0.20	+0.4
3,280,668	+		BPHYT_RS34225	0.25	+0.2
3,280,668	+		BPHYT_RS34225	0.25	+0.1
3,280,668	+		BPHYT_RS34225	0.25	+0.9
3,280,730	+		BPHYT_RS34225	0.31	-0.6
3,280,801	+		BPHYT_RS34225	0.38	+0.1
3,280,801	+		BPHYT_RS34225	0.38	-0.2
3,280,801	+		BPHYT_RS34225	0.38	-1.9
3,281,085	+		BPHYT_RS34225	0.65	+0.5
3,281,092	-		BPHYT_RS34225	0.66	+1.1
3,281,474	+				-1.7
3,281,475	-				-0.6
3,281,637	+				-0.1
3,281,637	+				-1.0
3,281,637	+				-1.6
3,281,637	+				-0.5
3,281,803	-		BPHYT_RS34230	0.19	+0.9
3,282,141	+		BPHYT_RS34230	0.45	+0.7
3,282,525	+		BPHYT_RS34230	0.75	+0.1
3,282,526	-		BPHYT_RS34230	0.75	-0.1
3,282,526	-		BPHYT_RS34230	0.75	+1.4
3,282,759	+				-0.1
3,282,810	+				+0.2
3,282,986	-		BPHYT_RS34235	0.22	-1.1
3,283,232	+				+0.2
3,283,531	+		BPHYT_RS34240	0.25	-0.5
3,283,531	+				+0.9
3,283,655	-		BPHYT_RS34240	0.36	-0.2