Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS32385

Experiment: 36hr PHYTO10 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO10 MOI 1
2,836,587	-				-0.2
2,836,587	-				-0.2
2,836,786	-				+1.2
2,836,836	-				-0.2
2,836,981	-				-0.2
2,836,981	-				+0.1
2,836,981	-				-0.8
2,836,981	-				-1.3
2,837,139	-				-0.2
2,837,139	-				+0.0
2,837,177	-				-0.5
2,837,286	+				-0.5
2,837,286	+				+0.1
2,837,287	-				-0.3
2,837,330	-				+0.1
2,837,371	+				+0.5
2,837,494	+		BPHYT_RS32385	0.12	+0.7
2,837,494	+		BPHYT_RS32385	0.12	+2.7
2,837,495	-		BPHYT_RS32385	0.12	+0.2
2,837,495	-		BPHYT_RS32385	0.12	+0.2
2,837,495	-		BPHYT_RS32385	0.12	+1.2
2,837,496	+		BPHYT_RS32385	0.12	+0.5
2,837,497	-		BPHYT_RS32385	0.12	-1.8
2,837,498	+		BPHYT_RS32385	0.12	-0.9
2,837,654	-		BPHYT_RS32385	0.24	-0.2
2,837,656	+		BPHYT_RS32385	0.24	-0.3
2,837,707	-		BPHYT_RS32385	0.28	+2.6
2,837,783	+		BPHYT_RS32385	0.34	-1.5
2,837,784	-		BPHYT_RS32385	0.34	-0.3
2,837,784	-		BPHYT_RS32385	0.34	-0.8
2,837,787	+		BPHYT_RS32385	0.34	-0.3
2,837,911	+		BPHYT_RS32385	0.43	+0.2
2,837,976	+		BPHYT_RS32385	0.48	+2.1
2,837,977	-		BPHYT_RS32385	0.48	+0.1
2,838,013	+		BPHYT_RS32385	0.51	-0.1
2,838,025	+		BPHYT_RS32385	0.52	-1.5
2,838,064	+		BPHYT_RS32385	0.55	-0.5
2,838,234	+		BPHYT_RS32385	0.68	-2.3
2,838,235	-		BPHYT_RS32385	0.68	-0.7
2,838,235	-		BPHYT_RS32385	0.68	-2.1
2,838,236	+		BPHYT_RS32385	0.68	-0.7
2,838,236	+		BPHYT_RS32385	0.68	+0.4
2,838,236	+		BPHYT_RS32385	0.68	+0.4
2,838,245	-		BPHYT_RS32385	0.69	+0.1
2,838,537	+				+0.1
2,838,576	+				+0.3
2,838,577	-				+0.2
2,838,578	+				+0.7
2,838,579	-				+1.0
2,838,603	+				-0.6
2,838,669	+				-0.5
2,838,669	+				+0.3
2,838,669	+				+0.4
2,838,909	+				+0.4
2,838,910	-				-0.5
2,838,928	+				+0.4
2,838,928	+				+0.8
2,838,929	-				-0.3
2,839,160	+				+0.1
2,839,161	-				+0.3
2,839,228	+				-0.2
2,839,229	-				-0.9
2,839,303	+				-1.2
2,839,304	-				-0.5
2,839,304	-				-1.3
2,839,304	-				-1.5
2,839,602	+				+0.5
2,839,603	-				-0.3