Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS27750

Experiment: 36hr PHYTO10 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO10 MOI 1
1,786,647	-		BPHYT_RS27745	0.13	-0.6
1,786,844	-		BPHYT_RS27745	0.43	-0.9
1,786,974	-		BPHYT_RS27745	0.62	-0.7
1,786,975	+		BPHYT_RS27745	0.62	-0.4
1,786,975	+		BPHYT_RS27745	0.62	-1.0
1,786,975	+		BPHYT_RS27745	0.62	-0.2
1,787,069	-		BPHYT_RS27745	0.76	-0.9
1,787,403	+				-0.7
1,787,403	+				-0.4
1,787,404	-				-0.5
1,787,798	-		BPHYT_RS27750	0.10	-0.1
1,787,936	-		BPHYT_RS27750	0.20	-1.5
1,788,039	+		BPHYT_RS27750	0.26	-0.9
1,788,245	+		BPHYT_RS27750	0.40	-0.8
1,788,629	+		BPHYT_RS27750	0.66	+0.4
1,788,630	-		BPHYT_RS27750	0.66	+0.1
1,788,640	+		BPHYT_RS27750	0.67	-0.3
1,788,640	+		BPHYT_RS27750	0.67	-0.9
1,788,641	-		BPHYT_RS27750	0.67	+0.2
1,788,641	-		BPHYT_RS27750	0.67	+0.9
1,788,758	-		BPHYT_RS27750	0.74	-1.7
1,789,133	+				-0.5
1,789,134	-				+0.2
1,789,263	-		BPHYT_RS27755	0.13	-0.5
1,789,473	-		BPHYT_RS27755	0.33	-1.3
1,789,532	+		BPHYT_RS27755	0.38	-1.6
1,789,610	+		BPHYT_RS27755	0.45	-0.1
1,790,009	+		BPHYT_RS27755	0.82	-0.5
1,790,132	+				+0.3
1,790,133	-				+0.3