Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS23740

Experiment: 36hr PHYTO10 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO10 MOI 1
893,146	-		BPHYT_RS23735	0.55	-1.0
893,722	+				+1.3
893,829	-				+0.0
893,934	+				-0.3
893,934	+				+0.1
893,934	+				+0.2
893,934	+				+0.7
893,935	-				+1.3
893,969	+				-0.5
893,970	-				-0.4
893,973	-				+0.5
893,973	-				-0.9
893,973	-				-1.3
894,035	-				+1.1
894,035	-				+0.0
894,035	-				-0.7
894,061	+				-1.7
894,061	+				-1.1
894,062	-				+0.1
894,062	-				-0.4
894,062	-				-1.0
894,238	-		BPHYT_RS23740	0.27	-1.1
894,388	+		BPHYT_RS23740	0.46	-0.5
894,389	-		BPHYT_RS23740	0.47	+1.1
894,473	+		BPHYT_RS23740	0.58	-0.8
894,474	-		BPHYT_RS23740	0.58	-3.3
894,474	-		BPHYT_RS23740	0.58	-1.8
894,474	-		BPHYT_RS23740	0.58	-0.2
894,583	+		BPHYT_RS23740	0.72	-1.5
894,835	-				+0.7
894,939	-				+0.8
894,981	+				+0.1
895,040	-				-0.3
895,040	-				-1.5
895,040	-				+0.6
895,061	-				-0.8
895,305	-				+0.4
895,635	+		BPHYT_RS23750	0.12	-0.2
895,635	+		BPHYT_RS23750	0.12	-2.3
895,662	+		BPHYT_RS23750	0.14	-0.9