Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS19810

Experiment: 36hr PHYTO10 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO10 MOI 1
4,456,445	+		BPHYT_RS19800	0.74	-1.1
4,456,565	+		BPHYT_RS19800	0.82	+0.1
4,456,565	+		BPHYT_RS19800	0.82	-0.1
4,456,566	-		BPHYT_RS19800	0.83	-0.0
4,456,922	-		BPHYT_RS19805	0.24	-0.6
4,457,239	+				-0.5
4,457,427	+				-1.9
4,457,428	-				-1.3
4,457,698	+		BPHYT_RS19810	0.22	-0.1
4,457,699	-		BPHYT_RS19810	0.22	-1.1
4,457,699	-		BPHYT_RS19810	0.22	+0.0
4,457,699	-		BPHYT_RS19810	0.22	+0.0
4,457,699	-		BPHYT_RS19810	0.22	-1.4
4,458,020	+				-0.0
4,458,751	+		BPHYT_RS19810	0.87	+0.3
4,458,752	-		BPHYT_RS19810	0.87	-0.4
4,458,752	-		BPHYT_RS19810	0.87	-0.6
4,458,776	-		BPHYT_RS19810	0.88	-1.1
4,458,812	-				+0.1
4,458,814	+				-0.7
4,458,814	+				+0.3
4,458,814	+				-0.4
4,458,814	+				-1.1
4,458,814	+				-1.3
4,458,814	+				-0.0
4,458,815	-				-1.0
4,458,815	-				+1.1
4,458,816	+				-0.1
4,458,816	+				+0.5
4,458,817	-				+0.2
4,459,067	-				-1.3
4,459,067	-				-1.2
4,459,151	+				+1.7
4,459,151	+				+2.1
4,459,152	-				+0.4
4,459,395	+				-0.6
4,459,466	+				-1.0
4,459,467	-				-0.6
4,459,503	-				+0.4
4,459,609	-				-1.8
4,459,664	+				+0.1
4,459,712	-				-0.8
4,459,722	-				-0.3
4,459,722	-				+0.5
4,459,722	-				+1.5