Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS16640

Experiment: 36hr PHYTO10 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO10 MOI 1
3,767,866	-		BPHYT_RS16630	0.41	+0.6
3,767,866	-		BPHYT_RS16630	0.41	+4.1
3,767,866	-		BPHYT_RS16630	0.41	+0.6
3,767,932	-		BPHYT_RS16630	0.51	+0.1
3,767,932	-		BPHYT_RS16630	0.51	-0.3
3,767,932	-		BPHYT_RS16630	0.51	+0.3
3,767,965	+		BPHYT_RS16630	0.56	+0.2
3,767,989	-		BPHYT_RS16630	0.60	-1.0
3,770,145	-				-1.4
3,770,145	-				-0.3
3,770,145	-				-0.7
3,770,243	-				-0.2
3,770,264	+				-0.6
3,770,265	-				+0.7
3,770,272	+				+0.0
3,770,272	+				+1.1
3,770,542	+		BPHYT_RS16645	0.20	+0.1
3,770,650	+		BPHYT_RS16645	0.30	+0.2
3,770,651	-		BPHYT_RS16645	0.30	+3.6
3,770,651	-		BPHYT_RS16645	0.30	-0.4
3,770,651	-		BPHYT_RS16645	0.30	-0.8
3,770,653	-		BPHYT_RS16645	0.30	-1.4
3,770,698	-		BPHYT_RS16645	0.34	-0.1
3,770,839	-		BPHYT_RS16645	0.47	+0.4