Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS14330

Experiment: 36hr PHYTO10 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO10 MOI 1
3,272,306	+				-0.5
3,272,345	+				-0.6
3,272,345	+				-0.8
3,272,345	+				+0.4
3,272,345	+				+0.1
3,272,345	+				+0.5
3,272,345	+				+1.1
3,272,345	+				+0.7
3,272,345	+				-0.5
3,272,345	+				+0.1
3,272,345	+				-1.2
3,272,371	+				+0.6
3,272,388	+				-1.1
3,272,400	+				-0.0
3,272,400	+				+0.1
3,272,551	+				-0.0
3,272,576	+				-0.0
3,273,262	-				+1.2
3,273,262	-				+0.6
3,273,262	-				+0.3
3,273,350	+				-2.1
3,273,350	+				-2.0
3,273,351	-				+0.8
3,273,351	-				+0.6
3,273,397	-				+0.4
3,273,399	-				+0.5
3,273,579	-		BPHYT_RS14335	0.67	-0.9
3,273,665	+				+0.1
3,273,666	-				+0.7
3,273,666	-				+0.8
3,273,696	-				+0.9
3,273,696	-				+1.0
3,273,696	-				+1.0
3,273,714	-				+0.5
3,273,799	+				-0.6
3,273,800	-				+0.0
3,273,800	-				+1.1
3,273,800	-				+0.8
3,273,800	-				+1.1
3,273,834	-				-0.1
3,273,834	-				+0.5
3,273,841	-				+0.4
3,273,923	-				+0.5
3,274,008	-				+2.1