Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS11085

Experiment: 36hr PHYTO10 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO10 MOI 1
2,518,874	-				+0.2
2,519,067	+		BPHYT_RS11080	0.86	+0.6
2,519,067	+		BPHYT_RS11080	0.86	+1.4
2,519,067	+		BPHYT_RS11080	0.86	+1.9
2,519,348	+				+0.0
2,519,633	+				+2.0
2,519,634	-				-0.4
2,519,640	+				+0.0
2,519,643	-				-0.6
2,519,646	+				-0.6
2,519,706	+				+0.7
2,519,707	-				-0.3
2,519,707	-				-1.1
2,519,780	-				-0.9
2,519,805	+				+1.2
2,519,806	-				-0.5
2,519,806	-				+0.0
2,520,004	+		BPHYT_RS11085	0.11	+0.4
2,520,004	+		BPHYT_RS11085	0.11	-0.4
2,520,005	-		BPHYT_RS11085	0.11	-0.2
2,520,005	-		BPHYT_RS11085	0.11	+0.6
2,520,256	+		BPHYT_RS11085	0.29	+0.0
2,520,257	-		BPHYT_RS11085	0.29	+0.7
2,520,257	-		BPHYT_RS11085	0.29	-0.5
2,520,257	-		BPHYT_RS11085	0.29	-0.6
2,520,257	-		BPHYT_RS11085	0.29	-3.0
2,520,379	+		BPHYT_RS11085	0.38	+0.4
2,520,379	+		BPHYT_RS11085	0.38	+0.4
2,520,379	+		BPHYT_RS11085	0.38	+0.4
2,520,379	+		BPHYT_RS11085	0.38	-0.2
2,520,380	-		BPHYT_RS11085	0.38	+0.2
2,520,568	+		BPHYT_RS11085	0.52	+0.5
2,520,569	-		BPHYT_RS11085	0.52	+1.0
2,521,727	+				-0.5
2,521,970	+		BPHYT_RS11095	0.28	+0.9
2,522,033	+		BPHYT_RS11095	0.38	-0.1