Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS10005

Experiment: 36hr PHYTO10 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO10 MOI 1
2,278,966	+		BPHYT_RS10000	0.59	-0.6
2,279,061	+		BPHYT_RS10000	0.64	+1.4
2,279,504	+		BPHYT_RS10000	0.88	-0.3
2,279,504	+		BPHYT_RS10000	0.88	-0.5
2,279,504	+		BPHYT_RS10000	0.88	-0.7
2,279,505	-		BPHYT_RS10000	0.88	-0.2
2,279,505	-		BPHYT_RS10000	0.88	+1.0
2,280,111	+		BPHYT_RS10005	0.48	+0.7
2,280,111	+		BPHYT_RS10005	0.48	-2.4
2,280,363	-				+0.6
2,280,369	-				+0.3
2,281,059	+		BPHYT_RS10015	0.31	+0.6
2,281,060	-		BPHYT_RS10015	0.31	+0.3
2,281,079	+		BPHYT_RS10015	0.34	+1.4
2,281,179	-		BPHYT_RS10015	0.49	-0.7
2,281,245	-		BPHYT_RS10015	0.58	+1.9
2,281,245	-		BPHYT_RS10015	0.58	-0.5
2,281,245	-		BPHYT_RS10015	0.58	-1.3