Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS09300

Experiment: 36hr PHYTO10 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO10 MOI 1
2,108,178	+				+0.8
2,108,206	+				-0.0
2,108,252	-				-0.2
2,108,282	+				-0.5
2,108,283	-				-1.6
2,108,288	-				+0.4
2,109,893	+		BPHYT_RS09305	0.43	-0.6
2,110,067	+		BPHYT_RS09305	0.74	-0.9
2,110,068	-		BPHYT_RS09305	0.75	-0.9
2,110,068	-		BPHYT_RS09305	0.75	+0.3
2,110,188	+				-0.4
2,110,276	+				+0.3
2,110,276	+				-0.5
2,110,276	+				-1.6
2,110,277	-				-0.1
2,110,277	-				-0.3
2,110,529	+		BPHYT_RS09310	0.12	-1.0
2,110,529	+		BPHYT_RS09310	0.12	+0.2
2,110,530	-		BPHYT_RS09310	0.12	+0.3