Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS09285

Experiment: 36hr PHYTO10 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO10 MOI 1
2,102,657	+		BPHYT_RS09280	0.38	-2.1
2,103,267	+				+1.6
2,103,267	+				-1.6
2,103,341	+				-0.2
2,103,787	-		BPHYT_RS09285	0.36	-0.8
2,103,845	+		BPHYT_RS09285	0.40	-1.7
2,103,846	-		BPHYT_RS09285	0.40	+2.0
2,103,899	+				+0.0
2,103,899	+		BPHYT_RS09285	0.45	-0.6
2,103,900	-		BPHYT_RS09285	0.45	+0.4
2,103,900	-		BPHYT_RS09285	0.45	+0.5
2,104,236	-		BPHYT_RS09285	0.73	+1.3
2,104,237	+		BPHYT_RS09285	0.73	-0.6
2,104,237	+		BPHYT_RS09285	0.73	+0.3
2,104,603	-				-0.1
2,104,720	-				-0.3
2,105,099	-		BPHYT_RS09290	0.11	+0.3
2,105,361	+		BPHYT_RS09290	0.18	-0.2
2,105,362	-		BPHYT_RS09290	0.18	-1.4