Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS08735

Experiment: 36hr PHYTO10 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO10 MOI 1
1,980,366	-				-1.4
1,980,769	-				+0.2
1,980,819	-				-1.2
1,980,855	-				-1.3
1,980,855	-				-1.9
1,980,855	-				-0.5
1,981,034	+		BPHYT_RS08730	0.57	-0.2
1,981,035	-		BPHYT_RS08730	0.57	+0.1
1,981,035	-		BPHYT_RS08730	0.57	-0.8
1,981,035	-		BPHYT_RS08730	0.57	-0.1
1,981,208	-				+0.4
1,981,498	-		BPHYT_RS08735	0.19	-0.5
1,981,599	-		BPHYT_RS08735	0.29	+1.3
1,981,767	-		BPHYT_RS08735	0.45	+0.9
1,981,767	-		BPHYT_RS08735	0.45	+1.6
1,981,951	-		BPHYT_RS08735	0.62	-0.4
1,982,041	-		BPHYT_RS08735	0.71	+0.3
1,982,136	+		BPHYT_RS08735	0.80	+0.0
1,982,557	+				-0.4
1,982,576	+				+0.3
1,982,577	-				+0.5
1,982,726	-		BPHYT_RS08740	0.19	-1.3
1,982,726	-		BPHYT_RS08740	0.19	-0.5
1,982,740	-		BPHYT_RS08740	0.20	-1.3
1,982,795	+		BPHYT_RS08740	0.24	-0.6