Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS08485

Experiment: 36hr PHYTO10 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO10 MOI 1
1,939,139	-		BPHYT_RS08475	0.37	-0.8
1,939,174	+		BPHYT_RS08475	0.49	-0.5
1,939,174	+		BPHYT_RS08475	0.49	-0.5
1,939,189	+		BPHYT_RS08475	0.54	+2.6
1,939,243	+		BPHYT_RS08475	0.72	-0.9
1,939,244	-		BPHYT_RS08475	0.72	-0.6
1,939,275	-		BPHYT_RS08475	0.83	-0.3
1,939,291	+		BPHYT_RS08475	0.88	-0.5
1,939,426	-		BPHYT_RS08480	0.24	+3.7
1,939,627	+		BPHYT_RS08480	0.72	-0.5
1,939,892	+				-0.1
1,940,030	+				-0.1
1,940,038	+				-0.8
1,940,153	+		BPHYT_RS08485	0.14	-1.1
1,940,153	+		BPHYT_RS08485	0.14	-1.0
1,940,178	+		BPHYT_RS08485	0.16	-1.3
1,940,696	+		BPHYT_RS08485	0.53	-0.2
1,941,009	-		BPHYT_RS08485	0.76	+0.7
1,941,182	-		BPHYT_RS08485	0.88	+0.0
1,941,319	-				-1.0
1,941,737	-		BPHYT_RS08490	0.48	-1.7
1,942,308	+				-0.5