Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS08240

Experiment: 36hr PHYTO10 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO10 MOI 1
1,881,903	-		BPHYT_RS08235	0.85	-1.5
1,882,020	-				-0.5
1,882,066	-				+0.2
1,882,085	+				-0.6
1,882,085	+				-0.3
1,882,085	+				-2.5
1,882,085	+				+1.3
1,882,086	-				-0.9
1,882,086	-				+0.6
1,882,086	-				-0.8
1,882,086	-				+0.6
1,882,086	-				-0.3
1,882,086	-				-0.6
1,882,096	+				-1.0
1,882,242	+				+1.7
1,882,336	-				-2.1
1,882,336	-				+1.1
1,882,396	-				-0.6
1,882,729	+		BPHYT_RS08240	0.36	+0.1
1,882,729	+		BPHYT_RS08240	0.36	-1.2
1,882,729	+		BPHYT_RS08240	0.36	-0.2
1,882,730	-		BPHYT_RS08240	0.36	-0.9
1,882,856	-		BPHYT_RS08240	0.60	+2.1
1,882,856	-		BPHYT_RS08240	0.60	+0.1
1,883,511	+		BPHYT_RS08245	0.52	+1.0
1,883,512	-		BPHYT_RS08245	0.52	-0.1
1,883,520	+		BPHYT_RS08245	0.53	-1.1
1,883,634	+		BPHYT_RS08245	0.66	-0.2
1,883,635	-		BPHYT_RS08245	0.66	+1.5
1,883,733	+		BPHYT_RS08245	0.78	-0.7
1,883,734	-		BPHYT_RS08245	0.78	+0.7
1,883,803	-				-0.3