Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS07200

Experiment: 36hr PHYTO10 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO10 MOI 1
1,636,533	+				-1.6
1,636,569	-				-0.8
1,637,137	+				-0.8
1,637,161	+				+0.2
1,637,181	+				+1.0
1,637,182	-				+0.4
1,637,182	-				+1.4
1,637,185	+				+1.6
1,637,186	-				-1.1
1,637,207	-				-0.2
1,637,333	+		BPHYT_RS07200	0.19	+1.1
1,637,613	-		BPHYT_RS07200	0.47	+1.3
1,637,951	+		BPHYT_RS07200	0.81	+0.2
1,637,951	+		BPHYT_RS07200	0.81	-0.0
1,637,952	-		BPHYT_RS07200	0.81	+0.4
1,638,134	+				+0.3
1,638,135	-				+0.5
1,638,440	+		BPHYT_RS07205	0.35	+1.0
1,638,441	-		BPHYT_RS07205	0.35	-1.0