Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS35735

Experiment: 36hr PHYTO4 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO4 MOI 1
3,605,977	-		BPHYT_RS35725	0.60	-0.4
3,606,046	-		BPHYT_RS35725	0.68	-1.5
3,606,131	+		BPHYT_RS35725	0.78	-0.5
3,606,312	+				-0.9
3,606,313	-				-0.2
3,606,313	-				-0.9
3,606,313	-				+0.6
3,606,313	-				-0.0
3,606,313	-				+0.1
3,606,335	+				-0.0
3,606,335	+				+0.7
3,606,335	+				-0.4
3,606,335	+				+0.1
3,606,336	-				+0.2
3,606,336	-				+0.1
3,606,569	+		BPHYT_RS35730	0.51	+0.1
3,606,569	+		BPHYT_RS35730	0.51	+0.5
3,606,929	-				+0.1
3,606,930	+				-0.0
3,606,931	-				+0.6
3,606,931	-				+0.2
3,606,931	-				+0.2
3,606,931	-				+0.1
3,607,118	+		BPHYT_RS35735	0.26	-1.1
3,607,151	+		BPHYT_RS35735	0.32	-0.8
3,607,517	-				+0.1
3,607,517	-				+1.0
3,607,517	-				-0.3
3,607,517	-				+1.9
3,607,517	-				+1.6
3,607,645	+				+1.9
3,607,645	+				-1.3
3,607,656	+				-2.0
3,607,951	-				-0.1
3,608,137	+		BPHYT_RS35740	0.19	+1.0
3,608,138	-		BPHYT_RS35740	0.19	-0.7
3,608,397	+		BPHYT_RS35740	0.40	-0.6
3,608,470	+		BPHYT_RS35740	0.46	+1.2