Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS35725

Experiment: 36hr PHYTO4 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO4 MOI 1
3,604,718	+				-0.2
3,604,755	-				-0.4
3,604,857	+		BPHYT_RS35720	0.15	-0.1
3,604,858	-		BPHYT_RS35720	0.15	-0.8
3,604,858	-		BPHYT_RS35720	0.15	-0.5
3,604,858	-		BPHYT_RS35720	0.15	-1.5
3,604,858	-		BPHYT_RS35720	0.15	-1.2
3,605,055	+		BPHYT_RS35720	0.44	+0.3
3,605,055	+		BPHYT_RS35720	0.44	-1.3
3,605,419	-				-1.8
3,605,419	-				+1.1
3,605,977	-		BPHYT_RS35725	0.60	-0.4
3,606,046	-		BPHYT_RS35725	0.68	-1.5
3,606,131	+		BPHYT_RS35725	0.78	-0.5
3,606,312	+				-0.9
3,606,313	-				-0.2
3,606,313	-				-0.9
3,606,313	-				+0.6
3,606,313	-				-0.0
3,606,313	-				+0.1
3,606,335	+				-0.0
3,606,335	+				+0.7
3,606,335	+				-0.4
3,606,335	+				+0.1
3,606,336	-				+0.2
3,606,336	-				+0.1
3,606,569	+		BPHYT_RS35730	0.51	+0.1
3,606,569	+		BPHYT_RS35730	0.51	+0.5
3,606,929	-				+0.1
3,606,930	+				-0.0
3,606,931	-				+0.6
3,606,931	-				+0.2
3,606,931	-				+0.2
3,606,931	-				+0.1
3,607,118	+		BPHYT_RS35735	0.26	-1.1
3,607,151	+		BPHYT_RS35735	0.32	-0.8