Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS35665

Experiment: 36hr PHYTO4 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO4 MOI 1
3,592,222	+		BPHYT_RS35655	0.70	-1.4
3,592,238	-		BPHYT_RS35655	0.76	-1.6
3,592,372	+				-0.6
3,592,373	-				+0.6
3,592,408	+				+0.3
3,592,428	+				+0.1
3,592,493	-		BPHYT_RS35660	0.14	-0.5
3,592,559	+		BPHYT_RS35660	0.22	-1.5
3,592,817	-		BPHYT_RS35660	0.52	+0.1
3,593,001	-		BPHYT_RS35660	0.74	-0.3
3,593,001	-		BPHYT_RS35660	0.74	+0.9
3,593,154	+				-1.8
3,593,350	-		BPHYT_RS35665	0.15	-2.7
3,593,355	+		BPHYT_RS35665	0.15	+0.2
3,593,356	-		BPHYT_RS35665	0.15	-1.0
3,593,434	-		BPHYT_RS35665	0.24	+2.0
3,593,811	+		BPHYT_RS35665	0.66	+0.9
3,594,123	+				+0.1
3,594,140	+				+1.0
3,594,178	+				-0.6
3,594,605	-		BPHYT_RS35670	0.28	+1.0
3,594,899	-		BPHYT_RS35670	0.52	-0.2
3,595,042	+		BPHYT_RS35670	0.64	-1.6
3,595,043	-		BPHYT_RS35670	0.64	-0.7
3,595,045	+		BPHYT_RS35670	0.64	-0.7