Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS35050

Experiment: 36hr PHYTO4 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO4 MOI 1
3,465,077	-				+1.1
3,465,077	-				-2.6
3,465,130	+				-0.0
3,465,131	-				+0.9
3,465,225	+		BPHYT_RS35045	0.15	+0.5
3,465,226	-		BPHYT_RS35045	0.15	-0.3
3,465,493	-		BPHYT_RS35045	0.50	+0.0
3,465,666	+		BPHYT_RS35045	0.72	-0.1
3,465,697	-		BPHYT_RS35045	0.76	+0.2
3,465,928	-				-0.6
3,466,206	+		BPHYT_RS35050	0.23	-1.5
3,466,206	+		BPHYT_RS35050	0.23	-0.1
3,466,206	+		BPHYT_RS35050	0.23	+0.6
3,466,206	+		BPHYT_RS35050	0.23	-1.4
3,466,207	-		BPHYT_RS35050	0.24	+0.5
3,466,273	-		BPHYT_RS35050	0.30	-0.4
3,466,604	+		BPHYT_RS35050	0.60	+0.8
3,466,676	+		BPHYT_RS35050	0.66	-0.8
3,466,677	-		BPHYT_RS35050	0.66	-1.2
3,466,677	-		BPHYT_RS35050	0.66	-0.4
3,466,760	+		BPHYT_RS35050	0.74	+0.4
3,466,921	-		BPHYT_RS35050	0.88	-0.1
3,466,942	+				-0.2
3,466,942	+				+0.3
3,466,942	+				-0.1
3,466,948	+				+1.1
3,466,968	+				+2.6
3,466,968	+				+0.2
3,466,968	+				-0.4
3,466,968	+				+1.3
3,466,969	-				-0.2
3,466,969	-				-0.1
3,466,969	-				+0.9
3,466,969	-				+2.6
3,466,970	+				-1.6
3,466,971	-				+0.7
3,467,046	+				-1.9
3,467,047	-				+1.2
3,467,047	-				-1.2
3,467,119	-				+0.1
3,467,128	+				-0.7
3,467,129	-				+0.5
3,467,129	-				+2.9
3,467,129	-				-1.7
3,467,334	+				+2.0
3,467,455	+				+1.4
3,467,456	-				-1.4
3,467,456	-				-0.0
3,467,480	+				+0.2
3,467,481	-				-0.6
3,467,597	+				-0.7
3,467,856	-		BPHYT_RS35055	0.53	+0.3
3,467,970	-		BPHYT_RS35055	0.72	-0.4