Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS34525

Experiment: 36hr PHYTO4 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO4 MOI 1
3,352,350	+				-1.1
3,352,351	-				-0.0
3,352,375	+				+0.5
3,352,384	-				+0.5
3,352,628	-		BPHYT_RS34520	0.28	-1.1
3,352,628	-		BPHYT_RS34520	0.28	+0.8
3,352,798	+		BPHYT_RS34520	0.46	+0.0
3,352,802	+		BPHYT_RS34520	0.47	-0.5
3,352,803	-		BPHYT_RS34520	0.47	-0.4
3,352,871	+		BPHYT_RS34520	0.54	-1.6
3,353,066	-		BPHYT_RS34520	0.74	-1.2
3,353,162	+		BPHYT_RS34520	0.84	+1.8
3,353,180	+		BPHYT_RS34520	0.86	-1.5
3,353,387	-				-0.8
3,353,448	-		BPHYT_RS34525	0.12	+0.1
3,353,551	-		BPHYT_RS34525	0.20	-0.3
3,353,795	-		BPHYT_RS34525	0.41	-0.8
3,353,795	-		BPHYT_RS34525	0.41	-1.6
3,353,859	+		BPHYT_RS34525	0.46	-1.1
3,354,325	-		BPHYT_RS34525	0.85	-2.4
3,354,543	+				-0.7
3,354,544	-				-0.1
3,354,544	-				+1.0
3,354,544	-				+0.1
3,354,790	-		BPHYT_RS34530	0.19	+0.2
3,354,807	-		BPHYT_RS34530	0.21	-0.1