Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS34445

Experiment: 36hr PHYTO4 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO4 MOI 1
3,335,812	+		BPHYT_RS34440	0.38	-0.3
3,335,813	-		BPHYT_RS34440	0.38	+0.3
3,337,162	-		BPHYT_RS34445	0.59	+0.5
3,337,162	-		BPHYT_RS34445	0.59	-0.6
3,337,162	-		BPHYT_RS34445	0.59	+0.4
3,337,162	-		BPHYT_RS34445	0.59	+1.8
3,337,230	+		BPHYT_RS34445	0.69	-1.5
3,337,231	-		BPHYT_RS34445	0.69	+1.1
3,337,392	-				-0.4
3,337,547	+				-1.2
3,337,579	+				+0.4
3,337,579	+				-0.8
3,337,713	-				-1.3
3,337,713	-				-0.4
3,337,721	-				-0.7
3,337,919	-		BPHYT_RS34450	0.22	+2.5
3,337,954	-		BPHYT_RS34450	0.26	-1.1
3,338,231	+		BPHYT_RS34450	0.55	-1.2
3,338,231	+		BPHYT_RS34450	0.55	-1.6