Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS33465

Experiment: 36hr PHYTO4 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO4 MOI 1
3,093,412	-		BPHYT_RS33455	0.67	-0.9
3,093,589	+				+0.7
3,093,688	+				+0.1
3,094,066	+		BPHYT_RS33460	0.71	-0.3
3,094,255	+				+0.8
3,094,269	-				-1.3
3,094,288	+				+0.9
3,094,570	+		BPHYT_RS33465	0.15	-1.1
3,094,765	-		BPHYT_RS33465	0.31	-1.5
3,094,875	+		BPHYT_RS33465	0.40	+1.1
3,094,876	-		BPHYT_RS33465	0.40	+0.7
3,095,159	-		BPHYT_RS33465	0.63	-0.4
3,095,269	-		BPHYT_RS33465	0.72	-1.0
3,095,770	-				-0.1
3,095,852	-		BPHYT_RS33470	0.32	-1.0
3,095,852	-		BPHYT_RS33470	0.32	-1.1
3,095,852	-		BPHYT_RS33470	0.32	-0.1
3,095,852	-		BPHYT_RS33470	0.32	-0.8
3,095,852	-		BPHYT_RS33470	0.32	-1.2
3,095,852	-				+1.0
3,095,852	-		BPHYT_RS33470	0.32	-0.9
3,095,854	+		BPHYT_RS33470	0.33	-1.3
3,095,854	+		BPHYT_RS33470	0.33	-1.3
3,095,872	-		BPHYT_RS33470	0.39	-0.3
3,095,932	+		BPHYT_RS33470	0.62	+0.2
3,096,036	+				+0.3
3,096,036	+				-0.2
3,096,037	-				-0.4
3,096,054	+				-2.6
3,096,054	+				-0.6
3,096,071	-				+0.4
3,096,103	+				-0.7
3,096,124	-				-0.1
3,096,124	-				+0.4
3,096,276	-				-0.4
3,096,291	-				-0.1
3,096,392	-				+0.6
3,096,453	+				-1.0
3,096,453	+				-0.1