Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS33260

Experiment: 36hr PHYTO4 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO4 MOI 1
3,044,303	-		BPHYT_RS33255	0.36	-1.1
3,044,476	+		BPHYT_RS33255	0.58	-2.3
3,044,479	+		BPHYT_RS33255	0.59	-1.3
3,044,480	-		BPHYT_RS33255	0.59	-1.7
3,044,480	-		BPHYT_RS33255	0.59	+0.1
3,044,494	+		BPHYT_RS33255	0.61	-0.6
3,044,512	+		BPHYT_RS33255	0.63	+0.1
3,044,520	-		BPHYT_RS33255	0.64	-0.9
3,044,520	-		BPHYT_RS33255	0.64	-1.5
3,044,687	-		BPHYT_RS33255	0.85	-0.2
3,044,707	-		BPHYT_RS33255	0.87	-0.6
3,044,942	-				+0.7
3,044,942	-				+1.5
3,044,988	-				-1.2
3,044,995	+				-0.9
3,044,995	+				-0.2
3,045,094	+				+3.0
3,045,111	+				-0.8
3,045,111	+				-0.2
3,045,348	-		BPHYT_RS33260	0.63	-0.8
3,045,475	+				+1.0
3,045,556	-				-0.5
3,045,731	+				+0.1
3,046,087	-		BPHYT_RS33265	0.42	-0.2
3,046,239	-		BPHYT_RS33265	0.56	-0.4
3,046,239	-		BPHYT_RS33265	0.56	+1.5
3,046,239	-		BPHYT_RS33265	0.56	-0.7