Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS33095
Experiment: 36hr PHYTO4 MOI 1
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | 36hr PHYTO4 MOI 1 |
---|---|---|---|---|---|
remove | |||||
3,001,694 | + | -0.3 | |||
3,001,868 | + | -0.4 | |||
3,001,886 | - | -0.7 | |||
3,002,104 | - | +0.8 | |||
3,003,204 | + | +2.5 | |||
3,003,534 | - | +0.4 | |||
3,003,586 | + | -0.3 | |||
3,003,651 | - | -0.3 | |||
3,003,654 | + | +0.5 | |||
3,003,750 | - | -1.1 |
Or see this region's nucleotide sequence