Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS32685

Experiment: 36hr PHYTO4 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO4 MOI 1
2,908,599	+		BPHYT_RS32680	0.42	-0.9
2,908,600	-		BPHYT_RS32680	0.42	-0.3
2,908,704	-		BPHYT_RS32680	0.50	+0.1
2,908,773	+		BPHYT_RS32680	0.56	-1.0
2,908,878	+		BPHYT_RS32680	0.65	+1.9
2,908,948	-		BPHYT_RS32680	0.71	-0.2
2,909,018	+		BPHYT_RS32680	0.77	+0.2
2,909,018	+		BPHYT_RS32680	0.77	+0.7
2,909,019	-		BPHYT_RS32680	0.77	-0.3
2,909,019	-		BPHYT_RS32680	0.77	-0.6
2,909,331	+				+2.5
2,909,332	-				-1.2
2,909,696	+		BPHYT_RS32685	0.34	-2.6
2,909,697	-		BPHYT_RS32685	0.34	-0.2
2,909,759	+		BPHYT_RS32685	0.39	-0.5
2,910,029	+		BPHYT_RS32685	0.62	+0.4
2,910,030	-		BPHYT_RS32685	0.62	+0.0
2,910,197	+		BPHYT_RS32685	0.77	+0.5
2,910,198	-		BPHYT_RS32685	0.77	-0.1
2,910,198	-		BPHYT_RS32685	0.77	+0.4
2,910,198	-		BPHYT_RS32685	0.77	+0.1
2,910,390	-				+0.2
2,910,390	-				-0.6
2,910,778	-		BPHYT_RS32690	0.32	+2.2
2,910,778	-		BPHYT_RS32690	0.32	+0.1
2,911,297	+				-1.4
2,911,369	-				+0.1
2,911,375	-				+1.9
2,911,386	+				+1.1
2,911,387	-				+0.6
2,911,397	+				+0.5