Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS31960

Experiment: 36hr PHYTO4 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO4 MOI 1
2,729,165	-		BPHYT_RS31955	0.17	-1.4
2,729,165	-		BPHYT_RS31955	0.17	+0.1
2,729,174	-		BPHYT_RS31955	0.18	-0.6
2,729,243	-		BPHYT_RS31955	0.25	-0.5
2,729,255	-		BPHYT_RS31955	0.27	+0.9
2,729,298	-		BPHYT_RS31955	0.31	-1.1
2,729,414	+		BPHYT_RS31955	0.44	+0.5
2,729,415	-		BPHYT_RS31955	0.44	+0.4
2,729,441	+		BPHYT_RS31955	0.47	-0.2
2,729,442	-		BPHYT_RS31955	0.47	+0.5
2,729,442	-		BPHYT_RS31955	0.47	-0.7
2,729,442	-		BPHYT_RS31955	0.47	-2.1
2,729,455	-		BPHYT_RS31955	0.49	+0.3
2,729,455	-		BPHYT_RS31955	0.49	-0.6
2,729,510	-		BPHYT_RS31955	0.55	-0.0
2,729,735	+		BPHYT_RS31955	0.80	-0.1
2,729,827	-				+0.0
2,730,222	+		BPHYT_RS31960	0.10	-0.3
2,730,667	+		BPHYT_RS31960	0.57	+3.1
2,730,758	+		BPHYT_RS31960	0.67	+0.2
2,730,759	-		BPHYT_RS31960	0.67	-1.5
2,731,081	+				+1.2
2,731,120	+				-0.1
2,731,145	+				+0.5
2,731,145	+				+2.2
2,731,277	-				-2.0
2,731,494	-		BPHYT_RS31965	0.29	-0.3
2,731,657	-		BPHYT_RS31965	0.43	+0.5
2,731,760	+		BPHYT_RS31965	0.52	-0.9
2,731,764	-		BPHYT_RS31965	0.52	-1.3
2,731,764	-		BPHYT_RS31965	0.52	+0.2
2,731,771	-		BPHYT_RS31965	0.53	-0.6
2,731,777	+		BPHYT_RS31965	0.54	-1.5
2,731,796	-		BPHYT_RS31965	0.55	+0.1
2,731,945	+		BPHYT_RS31965	0.68	-0.1
2,732,038	+		BPHYT_RS31965	0.77	-1.7