Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS31770

Experiment: 36hr PHYTO4 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO4 MOI 1
2,683,176	+		BPHYT_RS31765	0.57	-0.1
2,683,251	+		BPHYT_RS31765	0.62	-1.0
2,683,307	+		BPHYT_RS31765	0.67	-0.5
2,683,307	+		BPHYT_RS31765	0.67	+1.1
2,683,486	-		BPHYT_RS31765	0.80	+0.0
2,683,522	-		BPHYT_RS31765	0.83	-1.3
2,683,973	-				+1.2
2,683,973	-				-1.1
2,684,027	-				+0.6
2,684,099	+				+0.8
2,684,100	-				+0.5
2,684,234	+		BPHYT_RS31770	0.17	+0.3
2,684,235	-		BPHYT_RS31770	0.17	-0.1
2,684,473	-		BPHYT_RS31770	0.47	-0.1
2,684,564	+		BPHYT_RS31770	0.59	-0.8
2,684,567	-		BPHYT_RS31770	0.59	-0.1
2,684,567	-		BPHYT_RS31770	0.59	+0.5
2,684,882	+				-0.6
2,684,973	-				-2.2
2,685,016	+				+0.1
2,685,017	-				+0.9
2,685,099	+				-0.0
2,685,142	+				-1.6
2,685,147	-				-1.4
2,685,147	-				-1.2
2,685,277	+				-0.5
2,685,337	-				+0.4
2,685,422	+				+0.6
2,685,498	-				+2.0
2,685,611	-				+0.4
2,685,818	-				-0.8
2,685,840	-				+0.0
2,685,840	-				-0.9
2,685,847	-				-1.0