Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS31760

Experiment: 36hr PHYTO4 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO4 MOI 1
2,680,594	+				+0.8
2,680,755	+		BPHYT_RS31755	0.28	+0.3
2,680,784	+		BPHYT_RS31755	0.32	+0.0
2,680,823	+		BPHYT_RS31755	0.38	+1.1
2,680,868	-		BPHYT_RS31755	0.44	-0.1
2,680,944	+		BPHYT_RS31755	0.54	+1.5
2,681,243	-				+0.2
2,681,267	-				+2.5
2,682,019	-		BPHYT_RS31760	0.63	-1.6
2,682,021	+		BPHYT_RS31760	0.64	-0.3
2,682,021	+		BPHYT_RS31760	0.64	-1.2
2,682,022	-		BPHYT_RS31760	0.64	+0.2
2,682,107	-		BPHYT_RS31760	0.72	-1.0
2,682,353	+				+0.5
2,682,490	+				-0.4
2,682,751	+		BPHYT_RS31765	0.25	+0.8
2,682,768	+		BPHYT_RS31765	0.26	+0.9
2,682,910	+		BPHYT_RS31765	0.37	-1.3
2,682,925	-		BPHYT_RS31765	0.38	-0.6
2,683,176	+		BPHYT_RS31765	0.57	-0.1
2,683,251	+		BPHYT_RS31765	0.62	-1.0
2,683,307	+		BPHYT_RS31765	0.67	-0.5
2,683,307	+		BPHYT_RS31765	0.67	+1.1