Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS30330

Experiment: 36hr PHYTO4 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO4 MOI 1
2,359,411	+		BPHYT_RS30325	0.31	+1.9
2,359,566	+		BPHYT_RS30325	0.45	-2.5
2,359,576	-		BPHYT_RS30325	0.46	+0.1
2,359,576	-		BPHYT_RS30325	0.46	+0.6
2,359,662	+		BPHYT_RS30325	0.55	-0.3
2,359,829	-		BPHYT_RS30325	0.70	-0.4
2,359,980	+		BPHYT_RS30325	0.85	+1.0
2,359,981	-		BPHYT_RS30325	0.85	+0.1
2,360,558	+		BPHYT_RS30330	0.63	+0.9
2,360,611	-		BPHYT_RS30330	0.71	+0.0
2,361,031	+		BPHYT_RS30335	0.54	-0.3
2,361,032	-		BPHYT_RS30335	0.54	-0.1
2,361,460	-		BPHYT_RS30340	0.26	+0.9