Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS29915

Experiment: 36hr PHYTO4 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO4 MOI 1
2,263,323	-		BPHYT_RS29910	0.56	+0.9
2,263,461	-		BPHYT_RS29910	0.67	-0.9
2,263,698	-		BPHYT_RS29910	0.86	-1.2
2,263,935	+				-0.7
2,263,935	+				+0.0
2,263,935	+				-0.3
2,263,936	-				+0.8
2,263,936	-				+0.1
2,263,936	-				-0.2
2,263,954	+				-0.7
2,263,960	+				-0.6
2,264,105	-				+2.1
2,264,709	-		BPHYT_RS29915	0.62	-0.6
2,264,851	-		BPHYT_RS29915	0.82	-1.6
2,264,886	-		BPHYT_RS29915	0.87	-2.5
2,264,886	-		BPHYT_RS29915	0.87	-0.4
2,265,144	-		BPHYT_RS29920	0.85	-0.1
2,265,179	+				+1.9
2,265,283	-				-0.4
2,265,658	+				-1.4
2,265,659	-				-0.4
2,265,797	-		BPHYT_RS29925	0.20	+0.8
2,265,797	-		BPHYT_RS29925	0.20	-0.5
2,265,840	-		BPHYT_RS29925	0.23	+0.7