Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS26835

Experiment: 36hr PHYTO4 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO4 MOI 1
1,590,628	+		BPHYT_RS26825	0.43	-1.5
1,590,629	-		BPHYT_RS26825	0.43	+0.5
1,590,815	-		BPHYT_RS26825	0.68	+0.0
1,591,063	+				+0.1
1,591,063	+				-0.8
1,591,064	-				+1.1
1,591,130	+				+1.0
1,591,443	-		BPHYT_RS26830	0.78	+0.0
1,591,443	-		BPHYT_RS26830	0.78	+0.9
1,591,443	-		BPHYT_RS26830	0.78	+0.5
1,591,443	-		BPHYT_RS26830	0.78	-0.9
1,591,455	+		BPHYT_RS26830	0.80	-0.3
1,591,515	+				-0.4
1,591,744	-		BPHYT_RS26835	0.11	+1.8
1,592,004	+		BPHYT_RS26835	0.33	-1.5
1,592,428	-		BPHYT_RS26835	0.70	+0.3
1,592,526	+		BPHYT_RS26835	0.79	-0.2
1,592,527	-		BPHYT_RS26835	0.79	-0.4
1,592,702	+				+2.5
1,592,702	+				+1.9
1,592,720	+				-2.0
1,592,871	+				-0.2
1,592,871	+				-0.0
1,592,871	+				-0.4
1,592,871	+				-0.2
1,592,874	-				+0.1
1,592,903	+				+0.3
1,593,051	+				+1.6
1,593,654	-		BPHYT_RS26840	0.37	+0.4
1,593,654	-		BPHYT_RS26840	0.37	-1.4