Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS16680

Experiment: 36hr PHYTO4 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO4 MOI 1
3,775,920	-		BPHYT_RS16675	0.36	+0.5
3,776,027	+		BPHYT_RS16675	0.46	+2.4
3,776,184	+		BPHYT_RS16675	0.61	+1.4
3,776,633	+				-0.2
3,776,633	+				+3.9
3,776,633	+				+1.4
3,776,633	+				-0.5
3,776,634	-				+0.5
3,776,661	+				-0.2
3,776,706	-				+1.2
3,776,706	-				-1.3
3,776,706	-				-2.2
3,776,706	-				+0.2
3,776,706	-				+0.9
3,777,102	-		BPHYT_RS16680	0.35	-0.3
3,777,335	+		BPHYT_RS16680	0.60	-0.2
3,777,335	+		BPHYT_RS16680	0.60	-0.8
3,777,336	-		BPHYT_RS16680	0.61	-0.9
3,777,336	-		BPHYT_RS16680	0.61	-1.4
3,777,336	-		BPHYT_RS16680	0.61	-0.1
3,777,338	+		BPHYT_RS16680	0.61	-0.3
3,777,338	+		BPHYT_RS16680	0.61	-0.5
3,777,338	+		BPHYT_RS16680	0.61	-0.7
3,777,338	+		BPHYT_RS16680	0.61	+2.4
3,777,339	-		BPHYT_RS16680	0.61	-0.8
3,777,410	+		BPHYT_RS16680	0.69	+1.9
3,777,410	+		BPHYT_RS16680	0.69	-0.8
3,777,410	+		BPHYT_RS16680	0.69	-0.8
3,777,411	-		BPHYT_RS16680	0.69	-0.1
3,777,809	+				-0.1
3,778,603	+				-1.9
3,778,624	-		BPHYT_RS16690	0.13	+0.4
3,778,624	-		BPHYT_RS16690	0.13	-1.1
3,778,624	-		BPHYT_RS16690	0.13	+0.3
3,778,624	-		BPHYT_RS16690	0.13	-1.1
3,778,658	+		BPHYT_RS16690	0.18	-0.8