Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS15515

Experiment: 36hr PHYTO4 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO4 MOI 1
3,519,518	+		BPHYT_RS15510	0.58	+0.4
3,519,855	-		BPHYT_RS15510	0.78	+0.2
3,519,978	-		BPHYT_RS15510	0.85	+1.9
3,520,212	-				+0.8
3,520,794	+		BPHYT_RS15515	0.50	+0.4
3,520,794	+		BPHYT_RS15515	0.50	-0.5
3,520,862	-		BPHYT_RS15515	0.59	-1.1
3,521,224	+				-0.1
3,521,225	-				-1.0
3,521,423	+		BPHYT_RS15520	0.20	-0.3
3,521,656	-		BPHYT_RS15520	0.41	+1.0
3,521,688	+		BPHYT_RS15520	0.44	-0.7
3,521,732	+		BPHYT_RS15520	0.48	-0.5
3,521,733	-		BPHYT_RS15520	0.48	-0.2
3,521,733	-		BPHYT_RS15520	0.48	-0.3
3,521,736	+		BPHYT_RS15520	0.48	-1.1
3,521,737	-		BPHYT_RS15520	0.48	-0.7
3,521,855	+		BPHYT_RS15520	0.59	+1.1
3,521,856	-		BPHYT_RS15520	0.59	-1.6
3,521,856	-		BPHYT_RS15520	0.59	-1.3
3,521,856	-		BPHYT_RS15520	0.59	-0.2
3,521,909	+		BPHYT_RS15520	0.64	+0.5