Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS13805

Experiment: 36hr PHYTO4 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO4 MOI 1
3,144,573	+		BPHYT_RS13800	0.59	+2.4
3,144,574	-		BPHYT_RS13800	0.59	+0.0
3,144,574	-		BPHYT_RS13800	0.59	-0.0
3,144,716	+		BPHYT_RS13800	0.71	+0.1
3,144,717	-		BPHYT_RS13800	0.71	+1.4
3,144,798	+		BPHYT_RS13800	0.78	-0.2
3,144,825	-		BPHYT_RS13800	0.80	+0.1
3,145,274	-				-1.2
3,145,415	-				+0.1
3,145,416	+				-1.0
3,145,417	-				-1.8
3,145,417	-				+0.3
3,145,417	-				+2.4
3,145,639	+		BPHYT_RS13805	0.12	+0.6
3,145,691	-		BPHYT_RS13805	0.14	-1.0
3,146,068	+		BPHYT_RS13805	0.30	-0.4
3,146,082	-		BPHYT_RS13805	0.30	-0.0
3,146,264	-		BPHYT_RS13805	0.38	-0.0
3,146,264	-		BPHYT_RS13805	0.38	-1.1
3,146,265	+		BPHYT_RS13805	0.38	-1.0
3,146,265	+		BPHYT_RS13805	0.38	-1.0
3,146,328	+		BPHYT_RS13805	0.40	+0.4
3,146,328	+		BPHYT_RS13805	0.40	+0.5
3,146,329	-		BPHYT_RS13805	0.41	-0.0
3,146,443	-		BPHYT_RS13805	0.45	-2.2
3,146,443	-		BPHYT_RS13805	0.45	-1.0
3,146,443	-		BPHYT_RS13805	0.45	+0.8
3,146,473	-		BPHYT_RS13805	0.47	-1.5
3,146,489	+		BPHYT_RS13805	0.47	-2.5
3,146,531	-		BPHYT_RS13805	0.49	-1.1
3,146,539	-		BPHYT_RS13805	0.49	-0.2
3,146,580	+		BPHYT_RS13805	0.51	-1.2
3,146,580	+		BPHYT_RS13805	0.51	+0.8
3,146,581	-		BPHYT_RS13805	0.51	-2.2
3,146,614	+		BPHYT_RS13805	0.52	+0.2
3,146,860	-		BPHYT_RS13805	0.63	-2.5
3,146,947	+		BPHYT_RS13805	0.66	+0.1
3,147,014	-		BPHYT_RS13805	0.69	+0.2
3,147,159	-		BPHYT_RS13805	0.75	+0.3
3,147,515	-				+0.3
3,147,925	+				+0.8
3,148,508	-		BPHYT_RS13810	0.37	-0.3